4KCD
Crystal Structure of the NMDA Receptor GluN3A Ligand Binding Domain Apo State
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-02-14 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.029, 83.885, 99.139 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.449 - 1.680 |
R-factor | 0.1557 |
Rwork | 0.154 |
R-free | 0.18400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2rc7 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.307 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.740 |
High resolution limit [Å] | 1.680 | 1.680 |
Rmerge | 0.059 | 0.340 |
Number of reflections | 72079 | |
<I/σ(I)> | 27.9 | 6.9 |
Completeness [%] | 98.9 | 97.9 |
Redundancy | 7.1 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.4 | 293 | 10% PEG 6K, 0.1 M MES, 0.12 M NaCl, pH 5.4, VAPOR DIFFUSION, temperature 293K |