4K9Z
Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P6222
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X29A |
| Synchrotron site | NSLS |
| Beamline | X29A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-10-17 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.9793 |
| Spacegroup name | P 62 2 2 |
| Unit cell lengths | 60.960, 60.960, 173.890 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 9.977 - 1.800 |
| R-factor | 0.2023 |
| Rwork | 0.200 |
| R-free | 0.24730 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2lja |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.206 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (3.3.20) |
| Phasing software | AMoRE |
| Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 57.963 | 34.778 | 1.900 |
| High resolution limit [Å] | 1.800 | 5.690 | 1.800 |
| Rmerge | 0.076 | 0.026 | 0.721 |
| Total number of observations | 12949 | 58988 | |
| Number of reflections | 18641 | ||
| <I/σ(I)> | 24.5 | 22.6 | 1.1 |
| Completeness [%] | 99.9 | 97.5 | 100 |
| Redundancy | 21.3 | 18.4 | 22.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 298 | Protein (10 mM Hepes, pH 7.8, 150 mM NaCl, 10% glycerol); Reservoir (2.0 M Ammonium sulfate; Cryoprotection (20% glycerol), temperature 298K, VAPOR DIFFUSION, SITTING DROP |






