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4JKY

Cobalt between two ADP's in the active site of adenylate kinase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Wavelength(s)1.608600
Spacegroup nameP 21 21 21
Unit cell lengths67.550, 73.530, 87.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution53.463 - 2.373
R-factor0.2025
Rwork0.199
R-free0.26660
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.276
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASES
Refinement softwarePHENIX (1.7.1_743)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.2802.500
High resolution limit [Å]2.3702.370
Rmerge0.198
Number of reflections18108
<I/σ(I)>25.6
Completeness [%]99.797.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.42980.1M Sodium Acetate trihydrate, 0.2M Ammonium Acetate, 30% w/v Polyethylene Glycol 4000, ADP(17.3mM) and CoCl2(41.2mM), pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-15

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