Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ISJ

RNA Ligase RtcB in complex with Mn(II)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2012-04-16
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths81.038, 137.704, 149.013
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.490 - 2.344
R-factor0.1576
Rwork0.156
R-free0.19370
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.510
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.8_1069))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.4902.390
High resolution limit [Å]2.3442.350
Number of reflections70143
<I/σ(I)>12.2
Completeness [%]99.696.9
Redundancy7.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5298Crystals were grown from one part RtcB solution at 200 micromolar, mixed with one part reservoir solution, 2.1 M ammonium sulfate, 0.1 M bistris buffer. Crystals were cryoprotected in reservoir solution supplemented with 20% sucrose., pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon