4IL0
Crystal structure of GlucDRP from E. coli K-12 MG1655 (EFI target EFI-506058)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-12 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.978590 |
Spacegroup name | P 1 |
Unit cell lengths | 86.090, 94.030, 155.200 |
Unit cell angles | 101.47, 96.74, 79.86 |
Refinement procedure
Resolution | 19.860 - 2.800 |
R-factor | 0.1762 |
Rwork | 0.173 |
R-free | 0.23130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gyp |
RMSD bond length | 0.009 |
RMSD bond angle | 1.253 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8_1066) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.870 |
High resolution limit [Å] | 2.800 | 12.520 | 2.800 |
Rmerge | 0.143 | 0.033 | 0.539 |
Number of reflections | 112207 | 938 | 8417 |
<I/σ(I)> | 9.47 | 28.88 | 2.33 |
Completeness [%] | 97.3 | 72.7 | 97.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 282 | Protein solution was at 20 mg/mL containing 50 mM Tris (pH 7.5), 100 mM NaCl, 10 mM EDTA and 10 mM bME. Mother liqueur contained 0.2 M Na citrate (pH 4.6), 20% PEG 3,350. 20% glycerol was used as the cryoprotectant, vapor diffusion, hanging drop, temperature 282K |