4IKV
Crystal structure of peptide transporter POT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-22 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.00000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.761, 94.917, 57.253 |
Unit cell angles | 90.00, 111.10, 90.00 |
Refinement procedure
Resolution | 32.347 - 1.900 |
R-factor | 0.1825 |
Rwork | 0.181 |
R-free | 0.21570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SeM-substituted protein |
RMSD bond length | 0.007 |
RMSD bond angle | 1.053 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.7.2_869) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.053 | 0.033 | 0.201 |
Number of reflections | 35439 | ||
<I/σ(I)> | 15.6 | ||
Completeness [%] | 88.2 | 98.8 | 72.2 |
Redundancy | 2.8 | 4 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 6.5 | 293 | 40% PEG 400, 100 mM ADA-NaOH, 160 mM Li2SO4, 4 mM SrCl2, pH 6.5, lipidic cubic phase, temperature 293K |