4IG1
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, Mg(II)-AMP product bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-18 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 116.998, 46.890, 57.471 |
Unit cell angles | 90.00, 102.49, 90.00 |
Refinement procedure
Resolution | 28.558 - 1.432 |
R-factor | 0.1789 |
Rwork | 0.177 |
R-free | 0.21070 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4ifu |
RMSD bond length | 0.014 |
RMSD bond angle | 1.280 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.480 |
High resolution limit [Å] | 1.430 | 3.940 | 1.430 |
Rmerge | 0.060 | 0.036 | 0.559 |
Number of reflections | 53906 | ||
<I/σ(I)> | 13.3 | ||
Completeness [%] | 99.4 | 96.2 | 96.7 |
Redundancy | 3.7 | 3.6 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1 M MES, 0.8 M sodium acetate, 0.1 M NaCl, 20% (w/v) ethylene glycol, pH 6.5, hanging-drop vapor diffusion, temperature 293K |