4I9D
X-ray structure of NikA in complex with Fe-N,N'-Bis(2-pyridylmethyl)-N-carboxymethyl-N'-methyl
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.27985 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 86.670, 94.730, 124.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.940 - 1.700 |
R-factor | 0.1545 |
Rwork | 0.152 |
R-free | 0.19450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zlq |
RMSD bond length | 0.023 |
RMSD bond angle | 2.252 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.700 | 10.000 | 1.700 |
Rmerge | 0.060 | 0.035 | 0.358 |
Number of reflections | 113057 | 518 | 17608 |
<I/σ(I)> | 19.33 | 36.5 | 5.84 |
Completeness [%] | 99.7 | 79.3 | 99.7 |
Redundancy | 6.8 | 4.8 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.7 | 293 | 1.8 M ammonium sulfate, 100 mM sodium acetate pH 4.7, VAPOR DIFFUSION, temperature 293K |