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4I3X

Structure of phosphonoacetaldehyde dehydrogenase in complex with phosphonoacetate and cofactor NAD+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)0.97
Spacegroup nameP 1 21 1
Unit cell lengths95.162, 172.765, 142.596
Unit cell angles90.00, 107.28, 90.00
Refinement procedure
Resolution50.000 - 2.070
R-factor0.1643
Rwork0.162
R-free0.21680
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.019
RMSD bond angle2.066
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]136.16050.0002.110
High resolution limit [Å]2.0705.6202.070
Rmerge0.0980.0400.565
Number of reflections250280
<I/σ(I)>7.8
Completeness [%]94.198.474.9
Redundancy6.87.54.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5290PEG3350, pH 6.5, vapor diffusion, hanging drop, temperature 290K

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PDB entries from 2024-12-25

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