4I3X
Structure of phosphonoacetaldehyde dehydrogenase in complex with phosphonoacetate and cofactor NAD+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Detector technology | CCD |
Detector | MARRESEARCH |
Wavelength(s) | 0.97 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 95.162, 172.765, 142.596 |
Unit cell angles | 90.00, 107.28, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.070 |
R-factor | 0.1643 |
Rwork | 0.162 |
R-free | 0.21680 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.019 |
RMSD bond angle | 2.066 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 136.160 | 50.000 | 2.110 |
High resolution limit [Å] | 2.070 | 5.620 | 2.070 |
Rmerge | 0.098 | 0.040 | 0.565 |
Number of reflections | 250280 | ||
<I/σ(I)> | 7.8 | ||
Completeness [%] | 94.1 | 98.4 | 74.9 |
Redundancy | 6.8 | 7.5 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 290 | PEG3350, pH 6.5, vapor diffusion, hanging drop, temperature 290K |