Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4HMJ

Crystal structure of Staphylococcal nuclease variant Delta+PHS L36D at cryogenic temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyPIXEL
Collection date2012-07-17
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameP 1 21 1
Unit cell lengths31.168, 60.289, 38.342
Unit cell angles90.00, 93.30, 90.00
Refinement procedure
Resolution32.320 - 1.350
R-factor0.1808
Rwork0.180
R-free0.19980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3bdc
RMSD bond length0.020
RMSD bond angle1.968
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.2.1)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.370
High resolution limit [Å]1.3503.6601.350
Rmerge0.0940.0940.307
Number of reflections30941
<I/σ(I)>46.7
Completeness [%]99.898.4100
Redundancy6.66.56.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP827720% MPD, 25 mM potassium phosphate, with calcium chloride and pdTp added to protein in a 3:2:1 ratio, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon