4HM3
Naphthalene 1,2-Dioxygenase bound to ethylbenzene
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | NOIR-1 |
Wavelength(s) | 1.04 |
Spacegroup name | H 3 2 |
Unit cell lengths | 139.940, 139.940, 208.253 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 15.945 - 1.500 |
R-factor | 0.1668 |
Rwork | 0.165 |
R-free | 0.20320 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.146 |
Data reduction software | d*TREK (9.2LDz) |
Data scaling software | d*TREK |
Phasing software | AMoRE |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 15.990 | 15.990 | 1.550 |
High resolution limit [Å] | 1.500 | 3.220 | 1.500 |
Rmerge | 0.097 | 0.037 | 0.517 |
Total number of observations | 54676 | 30033 | |
Number of reflections | 124210 | ||
<I/σ(I)> | 7.8 | 24.4 | 1.8 |
Completeness [%] | 99.6 | 99.4 | 96.9 |
Redundancy | 3.95 | 4.21 | 2.51 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 279.15 | 1.9-2.2 M AMMONIUM SULFATE, 4-6%, DIOXANE, 0.1 M MES, pH 5.0, VAPOR DIFFUSION, temperature 279.15K |
1 | VAPOR DIFFUSION | 5 | 279.15 | 1.9-2.2 M AMMONIUM SULFATE, 4-6%, DIOXANE, 0.1 M MES, pH 5.0, VAPOR DIFFUSION, temperature 279.15K |