4HEC
Crystal structure of a putative uncharacterized protein from Mycobacterium tuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-08-31 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.780, 76.720, 106.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.390 - 1.800 |
R-factor | 0.1904 |
Rwork | 0.188 |
R-free | 0.22770 |
Structure solution method | SAD |
Starting model (for MR) | de novo phasing with iodide ions |
RMSD bond length | 0.014 |
RMSD bond angle | 1.652 |
Data scaling software | XSCALE |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.036 | 0.013 | 0.434 |
Number of reflections | 32926 | 444 | 2329 |
<I/σ(I)> | 27.29 | 102.63 | 2.44 |
Completeness [%] | 99.1 | 98 | 96.4 |
Redundancy | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | EMBio JCSG+ B4: 10% PEG 8000, 8% Ethylene glycol, 100mM HEPES pH 7.5; MytuD.18400.a.A1.PS01434 at 12.8mg/ml + 2.5mM AMPPNP and MgCl2, cryo: 20% EG; the structure was solved via iodide SAD: a crystal was soaked in reservoir plus 20% ethylene glycol and 750mM NaI, anomalous amplitudes are deposited, VAPOR DIFFUSION, SITTING DROP, temperature 290K |