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4HCW

Structure of a eukaryotic thiaminase-I

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97934
Spacegroup nameC 2 2 21
Unit cell lengths104.560, 203.050, 309.180
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.300 - 2.705
R-factor0.2309
Rwork0.229
R-free0.26530
Structure solution methodSIRAS, pseudo-MAD phasing, molecular replacement
RMSD bond length0.002
RMSD bond angle0.570
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.3002.760
High resolution limit [Å]2.7002.700
Rmerge0.843
Number of reflections89559
<I/σ(I)>36.52.4
Completeness [%]99.897.7
Redundancy14.510.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52931.7 M ammonium sulfate, 15% (v/v) glycerol, 1.7% (v/v) PEG 400, 85 mM HEPES , pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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