4H8A
Crystal structure of ureidoglycolate dehydrogenase in binary complex with NADH
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-04-10 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97948 |
| Spacegroup name | P 42 21 2 |
| Unit cell lengths | 162.509, 162.509, 60.988 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.072 - 1.640 |
| R-factor | 0.2304 |
| Rwork | 0.230 |
| R-free | 0.24640 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1xrh |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.139 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.7.2_869) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.700 |
| High resolution limit [Å] | 1.640 | 3.530 | 1.640 |
| Rmerge | 0.097 | 0.051 | 0.968 |
| Number of reflections | 99377 | ||
| <I/σ(I)> | 6 | ||
| Completeness [%] | 99.5 | 95.5 | 100 |
| Redundancy | 12 | 10.7 | 12.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 295 | 0.1 M MES, pH 6.0, 4.0 M sodium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K |






