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4H6W

Structure of Prenylagaramide maturation protease PagA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Detector technologyCCD
DetectorMARMOSAIC 225 mm CCD
Spacegroup nameI 2 2 2
Unit cell lengths49.700, 145.930, 193.499
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000 - 2.450
R-factor0.189
Rwork0.187
R-free0.23050
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.265
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.540
High resolution limit [Å]2.4505.2802.450
Rmerge0.0820.0340.491
Number of reflections24491
<I/σ(I)>8
Completeness [%]93.299.867.2
Redundancy5.55.63.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP281PEG 20000, vapor diffusion, hanging drop, temperature 281K

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PDB entries from 2024-12-25

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