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4H5Q

Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Hexamer Bound to Single-stranded DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0332
Spacegroup nameP 64 2 2
Unit cell lengths108.640, 108.640, 261.290
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution53.660 - 2.700
R-factor0.1911
Rwork0.189
R-free0.22990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lyf
RMSD bond length0.010
RMSD bond angle1.060
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHASER
Refinement softwareBUSTER-TNT (BUSTER 2.10.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]94.08553.6582.850
High resolution limit [Å]2.7008.5402.700
Rmerge0.0310.779
Total number of observations358715490
Number of reflections25771
<I/σ(I)>1016.81
Completeness [%]99.695.598.5
Redundancy4.444.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.529315% PEG3350, 350 mM sodium chloride, 100 mM Bis-Tris, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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