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4H5P

Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Tetramer Bound to Single-stranded RNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0332
Spacegroup nameC 1 2 1
Unit cell lengths77.640, 193.180, 77.420
Unit cell angles90.00, 108.89, 90.00
Refinement procedure
Resolution31.480 - 2.150
R-factor0.1822
Rwork0.180
R-free0.21860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lyf
RMSD bond length0.009
RMSD bond angle0.930
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHASER
Refinement softwareBUSTER-TNT (BUSTER 2.10.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]96.59048.4232.270
High resolution limit [Å]2.1506.8002.150
Rmerge0.0450.584
Total number of observations709221896
Number of reflections55733
<I/σ(I)>9.36.61.3
Completeness [%]95.599.177.9
Redundancy3.73.83.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.529318% PEG3350, 350 mM sodium chloride, 100 mM Bis-Tris, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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