4H5I
Crystal Structure of the Guanine Nucleotide Exchange Factor Sec12 (P1 form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-04-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.075 |
Spacegroup name | P 1 |
Unit cell lengths | 53.400, 53.474, 61.976 |
Unit cell angles | 81.68, 73.37, 87.58 |
Refinement procedure
Resolution | 42.359 - 1.360 |
R-factor | 0.1795 |
Rwork | 0.179 |
R-free | 0.19710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.248 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1144) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.370 |
High resolution limit [Å] | 1.350 | 3.660 | 1.350 |
Rmerge | 0.063 | 0.036 | 0.610 |
Number of reflections | 132685 | ||
<I/σ(I)> | 11.2 | ||
Completeness [%] | 93.6 | 88.1 | 79.8 |
Redundancy | 3.8 | 3.7 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 298 | 100 mM Tris, pH 8.0, 400 mM potassium chloride, 22% w/v PEG3350, VAPOR DIFFUSION, temperature 298K |