4GW1
cQFD Meditope
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 0.91837 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.257, 82.582, 211.630 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.850 - 2.240 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.22570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yy9 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.913 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 19.850 |
High resolution limit [Å] | 2.240 |
Number of reflections | 53800 |
Completeness [%] | 97.4 |
Redundancy | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 298 | Cetuximab Fab (5 mg/mL) was mixed with individual meditopes at a 1:10 molar ratio. Co-crystals that diffracted beyond 2.2 were grown in 100 mM sodium phosphate/citrate, 2.5 M sodium/potassium phosphate, and 1.6 % w/v meso-erythritol. The crystals were wicked through 14% (w/v) meso-erythritol and flash frozen in liquid nitrogen, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |