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4GW1

cQFD Meditope

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-1
Synchrotron siteSSRL
BeamlineBL9-1
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMAR scanner 345 mm plate
Wavelength(s)0.91837
Spacegroup nameP 21 21 21
Unit cell lengths64.257, 82.582, 211.630
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.850 - 2.240
R-factor0.1841
Rwork0.182
R-free0.22570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yy9
RMSD bond length0.004
RMSD bond angle0.913
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 Overall
Low resolution limit [Å]19.850
High resolution limit [Å]2.240
Number of reflections53800
Completeness [%]97.4
Redundancy4.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.5298Cetuximab Fab (5 mg/mL) was mixed with individual meditopes at a 1:10 molar ratio. Co-crystals that diffracted beyond 2.2 were grown in 100 mM sodium phosphate/citrate, 2.5 M sodium/potassium phosphate, and 1.6 % w/v meso-erythritol. The crystals were wicked through 14% (w/v) meso-erythritol and flash frozen in liquid nitrogen, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-15

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