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4GR3

Crystal structure of the catalytic domain of Human MMP12 in complex with selective phosphinic inhibitor RXP470A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]100
Detector technologyCCD
Collection date2009-09-20
DetectorADSC QUANTUM 4
Wavelength(s)0.9334
Spacegroup nameP 21 21 2
Unit cell lengths68.960, 63.130, 37.310
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.565 - 1.494
R-factor0.1821
Rwork0.180
R-free0.21580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4gql
RMSD bond length0.006
RMSD bond angle1.091
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.8_1069))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.580
High resolution limit [Å]1.4904.4601.490
Rmerge0.1060.0321.170
Number of reflections27049
<I/σ(I)>16.1256.411.97
Completeness [%]99.799.498.9
Redundancy7.96.166.98
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8293Protein: hMMP12(F171D) 643 microM. Reservoir: 18% PEG 10000, 0.2 M imidazole malate pH 8.0. Cryoprotectant: 27% PEG 8000, 15% monomethylPEG 550, 10% glycerol, 0.09 M Tris-HCl, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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