4GMA
Crystal structure of the adenosylcobalamin riboswitch
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97 |
| Spacegroup name | C 2 2 2 |
| Unit cell lengths | 96.648, 243.545, 87.102 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.260 - 3.940 |
| R-factor | 0.2628 |
| Rwork | 0.262 |
| R-free | 0.27520 |
| Structure solution method | MIR |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.867 |
| Data reduction software | XDS |
| Data scaling software | SCALA (3.3.20) |
| Phasing software | SHARP |
| Refinement software | BUSTER-TNT (BUSTER 2.10.0) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 88.374 | 88.374 | 4.890 |
| High resolution limit [Å] | 3.940 | 14.670 | 4.640 |
| Rmerge | 0.020 | 0.498 | |
| Total number of observations | 535 | 3067 | |
| Number of reflections | 8706 | ||
| <I/σ(I)> | 13.7 | 30.4 | 1.6 |
| Completeness [%] | 99.4 | 87.5 | 99.9 |
| Redundancy | 3.5 | 2.9 | 3.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | hanging drop | 7.5 | 298 | 10% isopropanol, 300 mM magnesium chloride, 100 mM sodium HEPES pH 7.5, hanging drop, temperature 298K |
| 1 | hanging drop | 7.5 | 298 | 10% isopropanol, 300 mM magnesium chloride, 100 mM sodium HEPES pH 7.5, hanging drop, temperature 298K |
| 1 | hanging drop | 7.5 | 298 | 10% isopropanol, 300 mM magnesium chloride, 100 mM sodium HEPES pH 7.5, hanging drop, temperature 298K |
| 1 | hanging drop | 7.5 | 298 | 10% isopropanol, 300 mM magnesium chloride, 100 mM sodium HEPES pH 7.5, hanging drop, temperature 298K |






