Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GKZ

HA1.7, a MHC class II restricted TCR specific for haemagglutinin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyCCD
Collection date2011-04-09
DetectorADSC QUANTUM 4
Wavelength(s)0.91730
Spacegroup nameP 1 21 1
Unit cell lengths69.240, 49.660, 72.610
Unit cell angles90.00, 94.33, 90.00
Refinement procedure
Resolution26.360 - 2.390
R-factor0.25127
Rwork0.249
R-free0.29812
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1fyt
RMSD bond length0.017
RMSD bond angle1.745
Data reduction softwarexia2
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]26.36426.3642.450
High resolution limit [Å]2.39010.6902.390
Rmerge0.0140.576
Number of reflections19445
<I/σ(I)>18.941.11.3
Completeness [%]98.493.699.6
Redundancy3.83.63.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5293100 mM Bis-Tris Propane, 200mM Sodium Bromide, 20% PEG 3350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon