4GIR
Crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, ethylene glycol and sulfate bound (ordered loops, space group P41212)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-27 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 146.836, 146.836, 169.524 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.230 - 2.000 |
R-factor | 0.1492 |
Rwork | 0.148 |
R-free | 0.19260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ggh |
RMSD bond length | 0.009 |
RMSD bond angle | 1.088 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 110.990 | 42.386 | 2.110 |
High resolution limit [Å] | 2.000 | 6.320 | 2.000 |
Rmerge | 0.133 | 0.059 | 0.673 |
Total number of observations | 28405 | 79331 | |
Number of reflections | 113621 | ||
<I/σ(I)> | 9.6 | 7.7 | 1.1 |
Completeness [%] | 91.7 | 98.1 | 80.7 |
Redundancy | 5.9 | 6.8 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | sitting drop vapor diffuction | 7.5 | 298 | Protein (10 mM Hepes pH 7.5, 150 mM NaCl, 10% glycerol, 1 mM DTT, 5 mM MgCl); Reservoir (2 M Ammonium Sulfate); Cryoprotection (Reservoir, + 20% ethylene glycol and 50 mM MgCl), sitting drop vapor diffuction, temperature 298K |