Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GGJ

Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2012-03-26
DetectorADSC QUANTUM 315
Wavelength(s)1.0750
Spacegroup nameP 43 21 2
Unit cell lengths38.741, 38.741, 214.529
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.120 - 1.750
R-factor0.175
Rwork0.174
R-free0.19700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1byr
RMSD bond length0.011
RMSD bond angle1.281
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0072)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.850
High resolution limit [Å]1.7501.750
Number of reflections17027
<I/σ(I)>225.8
Completeness [%]96.698.3
Redundancy6.86.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.527750 mM Bis-Tris, pH 6.5, 18% PEG-3350, 2% tascimate, pH 6.0, 1:100 m/m ratio protein:chymotrypsin, VAPOR DIFFUSION, HANGING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon