4GGJ
Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-03-26 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0750 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 38.741, 38.741, 214.529 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.120 - 1.750 |
R-factor | 0.175 |
Rwork | 0.174 |
R-free | 0.19700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1byr |
RMSD bond length | 0.011 |
RMSD bond angle | 1.281 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0072) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 1.850 |
High resolution limit [Å] | 1.750 | 1.750 |
Number of reflections | 17027 | |
<I/σ(I)> | 22 | 5.8 |
Completeness [%] | 96.6 | 98.3 |
Redundancy | 6.8 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 50 mM Bis-Tris, pH 6.5, 18% PEG-3350, 2% tascimate, pH 6.0, 1:100 m/m ratio protein:chymotrypsin, VAPOR DIFFUSION, HANGING DROP, temperature 277K |