Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GAL

CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH LACTOSE

Experimental procedure
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX9.5
Synchrotron siteSRS
BeamlinePX9.5
Temperature [K]289
Detector technologyIMAGE PLATE
Collection date1997-08
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths54.290, 65.410, 73.520
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.950
R-factor0.2
Rwork0.200
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)FREE GALECTIN-7
RMSD bond length0.010
RMSD bond angle30.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR (3.851)
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.050
High resolution limit [Å]1.9501.950
Rmerge0.047
Total number of observations80604

*

Number of reflections19246
<I/σ(I)>7.63.9
Completeness [%]96.892.4
Redundancy4.24.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.116

*

CRYSTALS WERE GROWN USING THE HANGING DROP METHOD FROM DROPS CONTAINING 9 MG/ML PROTEIN AT PH 8.1 IN 50 MM SODIUM PHOSPHATE BUFFER, 0.3 M SODIUM CHLORIDE, 20 MM IMIDAZOLE, 8.5% PEG 3350. DROPS WERE EQUILIBRATED AGAINST RESERVOIRS CONTAINING 50 MM SODIUM PHOSPHATE BUFFER, 0.3 M SODIUM CHLORIDE, 20 MM IMIDAZOLE, 17% PEG 3350. GALECTIN-7 CRYSTALS WERE THEN SOAKED WITH 5 MM LACTOSE FOR 2 HRS., vapor diffusion - hanging drop
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein9 (mg/ml)
21dropsodium phosphate50 (mM)
31drop0.3 (M)
41dropimidazol20 (mM)
51dropPEG33508.5 (%)
61reservoirsodium phosphate50 (mM)
71reservoir0.3 (M)
81reservoirimidazole20 (mM)
91reservoirPEG335017 (%)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon