4G9N
Crystal structure of the Rhizoctonia solani agglutinin in complex with N'-acetyl-galactosamine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SEALED TUBE |
| Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-01-18 |
| Detector | AGILENT ATLAS CCD |
| Wavelength(s) | 1.54178 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 130.583, 61.251, 32.839 |
| Unit cell angles | 90.00, 93.45, 90.00 |
Refinement procedure
| Resolution | 13.859 - 2.200 |
| R-factor | 0.1543 |
| Rwork | 0.150 |
| R-free | 0.23160 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 4g9m |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.137 |
| Data reduction software | CrysalisPro |
| Data scaling software | SCALA |
| Phasing software | REFMAC |
| Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 13.860 | 2.370 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Number of reflections | 13153 | |
| <I/σ(I)> | 11.5 | 5.8 |
| Completeness [%] | 99.5 | 99.3 |
| Redundancy | 4.33 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 289 | Reservoir: 0.1 M sodium acetate, pH 4.2, 20% v/v PEG8000, 0.2 M sodium chloride, 10 mM sodium citrate, a single native crystal was soaked in a solution of 12.9 mM N'-acetyl-galactosamine (GalNAc) in reservoir solution for 48 hours, VAPOR DIFFUSION, SITTING DROP, temperature 289K |






