4FPK
Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with 2-[(3-methylbenzyl)ammonio]ethanesulfonate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-18 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.231, 82.551, 116.299 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.870 - 2.400 |
R-factor | 0.1798 |
Rwork | 0.176 |
R-free | 0.25130 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.087 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 15.000 | 15.000 | 2.440 |
High resolution limit [Å] | 2.400 | 6.350 | 2.400 |
Rmerge | 0.060 | 0.043 | 0.103 |
Number of reflections | 25385 | ||
<I/σ(I)> | 26.9 | ||
Completeness [%] | 86.8 | 93.6 | 99.4 |
Redundancy | 4.3 | 4.6 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 7% PEG 8000, 0.1M IMIDAZOLE, pH 8.0, vapor diffusion, sitting drop, temperature 298K |