4F9F
Crystal Structure of VldE, the pseudo-glycosyltransferase, in complex with GDP and Trehalose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-03-03 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 320.821, 122.823, 93.857 |
Unit cell angles | 90.00, 91.62, 90.00 |
Refinement procedure
Resolution | 49.153 - 2.807 |
R-factor | 0.2136 |
Rwork | 0.211 |
R-free | 0.25820 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.466 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.153 | 2.960 |
High resolution limit [Å] | 2.807 | 2.807 |
Number of reflections | 88243 | |
Completeness [%] | 99.3 | 98.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 50 mM Tris-HCl, pH 8.0, 18-28% PEG3350, 200-500 mM sodium chloride, 20 mM magnesium chloride, 3% trehalose, 1 mM GDP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |