Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4F5O

Open ternary complex of R283K DNA polymerase beta with a one metal bound dCTP analog

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2011-05-03
DetectorRIGAKU SATURN 92
Wavelength(s)1.54178
Spacegroup nameP 1 21 1
Unit cell lengths54.480, 78.923, 55.134
Unit cell angles90.00, 106.61, 90.00
Refinement procedure
Resolution22.572 - 2.000
R-factor0.2096
Rwork0.203
R-free0.26730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3isb
RMSD bond length0.008
RMSD bond angle1.057
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwarePHENIX ((phenix.refine: 1.7_650))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.0002.7102.070
High resolution limit [Å]2.0002.5202.000
Rmerge0.0560.1170.379
Number of reflections151838
<I/σ(I)>14.292.8
Completeness [%]99.699.998.1
Redundancy5.75.83.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829150mM Imidazole, 350mM Sodium Acetate, 19% PEG3350, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon