4F5O
Open ternary complex of R283K DNA polymerase beta with a one metal bound dCTP analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-03 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.480, 78.923, 55.134 |
Unit cell angles | 90.00, 106.61, 90.00 |
Refinement procedure
Resolution | 22.572 - 2.000 |
R-factor | 0.2096 |
Rwork | 0.203 |
R-free | 0.26730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3isb |
RMSD bond length | 0.008 |
RMSD bond angle | 1.057 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.000 | 2.710 | 2.070 |
High resolution limit [Å] | 2.000 | 2.520 | 2.000 |
Rmerge | 0.056 | 0.117 | 0.379 |
Number of reflections | 151838 | ||
<I/σ(I)> | 14.29 | 2.8 | |
Completeness [%] | 99.6 | 99.9 | 98.1 |
Redundancy | 5.7 | 5.8 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 50mM Imidazole, 350mM Sodium Acetate, 19% PEG3350, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K |