4EHU
Activator of the 2-Hydroxyisocaproyl-CoA Dehydratase from Clostridium difficile with bound ADPNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-05-27 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.91841 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 66.105, 158.259, 62.988 |
Unit cell angles | 90.00, 111.97, 90.00 |
Refinement procedure
Resolution | 25.171 - 1.600 |
R-factor | 0.1727 |
Rwork | 0.171 |
R-free | 0.19670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4eht |
RMSD bond length | 0.008 |
RMSD bond angle | 1.537 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.6.1_357)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.700 |
High resolution limit [Å] | 1.600 | 1.600 |
Number of reflections | 76243 | |
<I/σ(I)> | 10.27 | 2.74 |
Completeness [%] | 96.7 | 99.5 |
Redundancy | 2.9 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 289 | 21 mg/mL protein in 50 mM MOPS, pH 7.2, 0.2 M sodium chloride, 3 mM ADPNP, 7.5 mM magnesium chloride, 1.9 mM D-desthiobiotin, 1.5 mM DTT, 6 mM sodium dithionite, reservoir: 3.5 M ammonium acetate, 0.1 M Tris-HCl, pH 8.5 (drop: 2 uL + 2 uL), VAPOR DIFFUSION, HANGING DROP, temperature 289K |