4EF1
Crystal structure of a pheromone cOB1 precursor/lipoprotein, YaeC family (EF2496) from Enterococcus faecalis V583 at 1.90 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-08 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.923, 96.485, 69.042 |
Unit cell angles | 90.00, 100.55, 90.00 |
Refinement procedure
Resolution | 29.380 - 1.900 |
R-factor | 0.1909 |
Rwork | 0.188 |
R-free | 0.23820 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.619 |
Data reduction software | XDS |
Data scaling software | XSCALE (December 29, 2011) |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.380 | 1.970 | |
High resolution limit [Å] | 1.900 | 4.080 | 1.900 |
Rmerge | 0.062 | 0.024 | 0.353 |
Number of reflections | 39597 | 7503 | 7523 |
<I/σ(I)> | 10.04 | 25.1 | 2.3 |
Completeness [%] | 92.4 | 92.8 | 91.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20.0% iso-Propanol, 20.0% PEG-4000, 0.1M Citrate pH 5.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |