4E4U
Crystal structure of a putative Mandelate racemase/Muconate lactonizing enzyme (Target PSI-200780) from Burkholderia SAR-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0750 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 118.835, 118.835, 120.839 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.641 - 1.350 |
R-factor | 0.1338 |
Rwork | 0.133 |
R-free | 0.14610 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.124 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.7.3_928) |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 1.390 | ||
High resolution limit [Å] | 1.350 | 6.040 | 1.350 |
Rmerge | 0.089 | 0.011 | 0.011 |
Number of reflections | 181393 | 1958 | 13267 |
<I/σ(I)> | 16.05 | 40.99 | 1.9 |
Completeness [%] | 99.9 | 95.7 | 98.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 298 | Protein (20 mM Hepes, pH 7.5, 150 mM NaCl, 10% glycerol; Reservoir (2.5M NaCl, Sodium Acetate 4.5, 0.2M Li2SO4- Wizard II #38); Cryoprotection (LI2SO4), Sitting Drop Vapor Diffusion, temperature 298K, VAPOR DIFFUSION, SITTING DROP |