Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4E2D

Structure of the old yellow enzyme from Trypanosoma cruzi

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE W01B-MX2
Synchrotron siteLNLS
BeamlineW01B-MX2
Temperature [K]100
Detector technologyCCD
Collection date2012-03-05
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.46
Spacegroup nameP 1 21 1
Unit cell lengths50.774, 118.469, 111.123
Unit cell angles90.00, 90.09, 90.00
Refinement procedure
Resolution40.000 - 1.997
R-factor0.19599
Rwork0.194
R-free0.24207
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4e2b
RMSD bond length0.014
RMSD bond angle1.645
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.070
High resolution limit [Å]1.9971.997
Rmerge0.0690.251
Number of reflections80586
Completeness [%]90.999.9
Redundancy3.94
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829228% (w/v) polyethylene glycol 1500, 0.3 M ammonium fluoride and 10% DMSO, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon