4DYZ
Crystal Structure of the apo form of Human H-Ferritin variant MIC1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-17 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.98 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 181.066, 181.066, 181.066 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 90.540 - 2.300 |
R-factor | 0.2231 |
Rwork | 0.219 |
R-free | 0.27150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cei |
RMSD bond length | 0.008 |
RMSD bond angle | 0.996 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.15) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 104.538 | 90.533 | 2.420 |
High resolution limit [Å] | 2.300 | 7.270 | 2.300 |
Rmerge | 0.041 | 0.397 | |
Total number of observations | 15792 | 72134 | |
Number of reflections | 11848 | ||
<I/σ(I)> | 36.1 | 14.3 | 1.9 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 42 | 34 | 42.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 50 mM Tris, 10 mM calcium chloride, 4% PEG 400, soaked in 20 mM EDTA, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |