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4DX3

Crystal structure of an enolase (mandelate racemase subgroup, target EFI-502086) from Agrobacterium tumefaciens, with a succinimide residue

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2012-02-01
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameI 4 2 2
Unit cell lengths114.540, 114.540, 129.060
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.556 - 1.650
R-factor0.1536
Rwork0.153
R-free0.17230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2pod
RMSD bond length0.007
RMSD bond angle1.103
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.7.3_928)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]85.66828.5561.740
High resolution limit [Å]1.6505.2201.650
Rmerge0.1160.0450.883
Total number of observations1908091995
Number of reflections51603
<I/σ(I)>15.114.30.8
Completeness [%]99.996.8100
Redundancy12.611.112.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1sitting drop vapor diffuction4298Protein (10 mM Tris, pH 8.0, 200 mM NaCl, 5 mM Mg; Reservoir (0.1 M NaCitrate pH 4.0, 0.8 M AmSO4); Cryoprotection (Reservoir, + 20% glycerol and 50 mM MgCl), sitting drop vapor diffuction, temperature 298K

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