4DU0
Crystal structure of human alpha-defensin 1, HNP1 (G17A mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-04 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.453, 50.083, 78.883 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.280 - 1.900 |
R-factor | 0.17683 |
Rwork | 0.175 |
R-free | 0.21219 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gny |
RMSD bond length | 0.020 |
RMSD bond angle | 1.787 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.144 | 0.859 |
Number of reflections | 12600 | |
<I/σ(I)> | 18 | 2.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.5 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 0.2 Magnesium Chloride, 0.1M HEPES, pH7.5, 30% isopropanol, VAPOR DIFFUSION, HANGING DROP, temperature 298K |