Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DTU

RB69 DNA Polymerase Ternary Complex with dGTP Opposite an Abasic Site and ddC/dG as the Penultimate Base-pair

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]110
Detector technologyCCD
Collection date2010-09-16
DetectorAPEX II CCD
Wavelength(s)0.97918
Spacegroup nameP 21 21 21
Unit cell lengths74.925, 120.012, 130.569
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.250 - 1.860
R-factor0.17118
Rwork0.170
R-free0.20138
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.159
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAMoRE
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.900
High resolution limit [Å]1.8641.864
Number of reflections92657
Completeness [%]94.692.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.5298100 mM CaCl2, 15% (w/v) PEG 350 monomethyl ether (MME), 100 mM Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, temperature 298K

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon