4DR4
Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-12-03 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 400.951, 400.951, 176.675 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.732 - 3.969 |
R-factor | 0.1561 |
Rwork | 0.153 |
R-free | 0.21240 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.527 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX (dev_978) |
Refinement software | PHENIX (dev_978) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 4.040 |
High resolution limit [Å] | 3.969 | 10.740 | 3.969 |
Rmerge | 0.253 | 0.040 | 0.992 |
Number of reflections | 123861 | ||
<I/σ(I)> | 3.9 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 7.3 | 7.1 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | HANGING DROP | 6.5 | 277 | MPD, pH 6.5, HANGING DROP, temperature 277K |