4DLP
Crystal structure of methionyl-tRNA synthetase MetRS from Brucella melitensis bound to selenomethionine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-03 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 116.250, 77.620, 116.270 |
Unit cell angles | 90.00, 119.67, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.650 |
R-factor | 0.1991 |
Rwork | 0.197 |
R-free | 0.23730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2x1l |
RMSD bond length | 0.012 |
RMSD bond angle | 1.421 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.720 | |
High resolution limit [Å] | 2.650 | 11.850 | 2.650 |
Rmerge | 0.071 | 0.018 | 0.486 |
Number of reflections | 52379 | 590 | 3809 |
<I/σ(I)> | 15.21 | 48.58 | 2.63 |
Completeness [%] | 99.3 | 92.6 | 99.5 |
Redundancy | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | BrabA.10201.a.A1 PW27667 at 28.7 mg/mL with 5 mM selenomethionine and 5 mM ATP against JCSG+ screen condition C3, 0.2 M ammonium nitrate, 20% PEG 3350, crystal tracking ID 226820c3, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K |