4DKY
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-10-29 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 55.115, 37.052, 64.854 |
Unit cell angles | 90.00, 115.29, 90.00 |
Refinement procedure
Resolution | 31.920 - 2.478 |
R-factor | 0.18596 |
Rwork | 0.183 |
R-free | 0.24786 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3C4I |
RMSD bond length | 0.026 |
RMSD bond angle | 2.390 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.542 |
High resolution limit [Å] | 2.478 | 6.780 | 2.478 |
Rmerge | 0.094 | 0.043 | 0.575 |
Number of reflections | 8546 | ||
<I/σ(I)> | 7.6 | ||
Completeness [%] | 81.3 | 98.9 | 99 |
Redundancy | 3.8 | 3.5 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 295 | 0.1M Tris-HCl, pH 6.7, 2.5M sodium formate, 10mM MnCl2, VAPOR DIFFUSION, HANGING DROP, temperature 295K |