4DGZ
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L125A at cryogenic temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.1000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 31.068, 60.399, 38.480 |
Unit cell angles | 90.00, 93.50, 90.00 |
Refinement procedure
Resolution | 32.410 - 1.470 |
R-factor | 0.1773 |
Rwork | 0.174 |
R-free | 0.21260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bdc |
RMSD bond length | 0.018 |
RMSD bond angle | 1.837 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.2.1) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.500 |
High resolution limit [Å] | 1.470 | 3.990 | 1.470 |
Rmerge | 0.054 | 0.053 | 0.169 |
Number of reflections | 23894 | ||
<I/σ(I)> | 19.3 | 8.3 | |
Completeness [%] | 98.5 | 97.3 | 86.2 |
Redundancy | 5.9 | 5.7 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 20% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |