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4DBX

Crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA

Replaces:  3R7ZReplaces:  3LZH
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-08-09
DetectorADSC QUANTUM 315r
Wavelength(s)0.97940
Spacegroup nameP 21 21 21
Unit cell lengths56.583, 63.177, 103.456
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.269 - 2.004
R-factor0.1872
Rwork0.185
R-free0.22900
Structure solution methodSAD
RMSD bond length0.005
RMSD bond angle0.903
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHELXS
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Number of reflections25489
<I/σ(I)>34.045.13
Completeness [%]99.596.3
Redundancy75.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52980.1 M HEPES, 10% PEG 6K, 5% MPD, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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