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4DAB

Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with hypoxanthine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE W01B-MX2
Synchrotron siteLNLS
BeamlineW01B-MX2
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 225 mm CCD
Spacegroup nameP 63 2 2
Unit cell lengths135.394, 135.394, 58.006
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.230 - 1.850
R-factor0.2027
Rwork0.201
R-free0.24120
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.528
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.920
High resolution limit [Å]1.8503.9901.850
Rmerge0.0570.0310.511
Number of reflections26504
<I/σ(I)>16.7
Completeness [%]97.298.891
Redundancy6.96.96.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION4.62910.1 M sodium acetate, 3.2 M sodium chloride, 5%(v/v) glycerol, pH 4.6, vapor diffusion, temperature 291K

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PDB entries from 2024-12-25

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