4D9X
The crystal structure of Coptisine bound to DNA d(CGTACG)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-08-09 |
Detector | OXFORD |
Wavelength(s) | 1.542 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 30.282, 30.282, 118.330 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 2.440 |
R-factor | 0.2659 |
Rwork | 0.261 |
R-free | 0.30740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3np6 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.955 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.590 |
High resolution limit [Å] | 2.440 | 7.090 | 2.440 |
Rmerge | 0.108 | 0.067 | 0.611 |
Number of reflections | 2642 | 136 | 404 |
<I/σ(I)> | 17.48 | 28.82 | 4.01 |
Completeness [%] | 99.5 | 99.3 | 97.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6 | 296 | MPD, MgCl2, KCl, spermine, pH 6.0, VAPOR DIFFUSION, temperature 296K |