4D9L
Fab structure of anti-HIV-1 gp120 V2 mAb 697
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.03330 |
Spacegroup name | P 1 |
Unit cell lengths | 68.322, 82.460, 93.212 |
Unit cell angles | 82.12, 70.41, 86.27 |
Refinement procedure
Resolution | 47.267 - 2.485 |
R-factor | 0.1796 |
Rwork | 0.176 |
R-free | 0.23760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2g75 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.255 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.267 | 2.540 |
High resolution limit [Å] | 2.485 | 2.485 |
Number of reflections | 65386 | |
<I/σ(I)> | 12.5 | |
Completeness [%] | 98.4 | 95.2 |
Redundancy | 3.8 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 296 | 18% polyethylene glycol 8000 and 0.1 M Tris pH 8.5 , VAPOR DIFFUSION, HANGING DROP, temperature 296K |