4D8M
Crystal structure of Bacillus thuringiensis Cry5B nematocidal toxin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-09-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97930 |
Spacegroup name | P 63 |
Unit cell lengths | 115.528, 115.528, 110.328 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.894 - 2.300 |
R-factor | 0.1749 |
Rwork | 0.173 |
R-free | 0.21790 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.132 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SOLVE |
Refinement software | PHENIX ((phenix.refine: 1.6.1_357)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.000 | 2.340 |
High resolution limit [Å] | 2.300 | 2.900 | 2.300 |
Number of reflections | 37218 | ||
Completeness [%] | 99.9 | 100 | 99.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 20% PEG 3350, 0.2 M sodium acetate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 20% PEG 3350, 0.2 M sodium acetate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |