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4D6E

Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the blood group A-trisaccharide (X01 mutant)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08B1-1
Synchrotron siteCLSI
Beamline08B1-1
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameC 2 2 21
Unit cell lengths92.270, 153.750, 96.880
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.800 - 1.450
R-factor0.12622
Rwork0.125
R-free0.15897
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wmi
RMSD bond length0.010
RMSD bond angle1.346
Data reduction softwareMOSFLM
Data scaling softwareAimless
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1301.530
High resolution limit [Å]1.4501.450
Rmerge0.0800.500
Number of reflections119839
<I/σ(I)>16.93.4
Completeness [%]98.899.9
Redundancy54.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
115% PEG 3350, 0.2M AMMONIUM SULFATE, 0.1M SODIUM ACETATE TRIHYDRATE PH 4.8

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PDB entries from 2024-05-15

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