Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4D5U

Structure of OmpF in I2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]140
Detector technologyPIXEL
Collection date2013-03-15
DetectorDECTRIS PILATUS 6M
Spacegroup nameI 1 2 1
Unit cell lengths159.730, 115.690, 222.854
Unit cell angles90.00, 104.95, 90.00
Refinement procedure
Resolution24.834 - 3.500
R-factor0.232
Rwork0.229
R-free0.28270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2zfg
RMSD bond length0.009
RMSD bond angle1.252
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE: 1.8.2_1309))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0003.610
High resolution limit [Å]3.5003.500
Rmerge0.1700.440
Number of reflections48149
<I/σ(I)>4.51.8
Completeness [%]97.697.9
Redundancy2.52.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1816% PEG 4000, 0.4 M NACL AND 10 MM CDCL2 AS AN ADDITIVE, pH 8

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon