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4D0Y

Crystal structure of DacB from Streptococcus pneumoniae D39

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
DetectorDECTRIS PILATUS 6M
Spacegroup nameP 1 21 1
Unit cell lengths50.950, 37.634, 102.837
Unit cell angles90.00, 97.98, 90.00
Refinement procedure
Resolution101.840 - 2.000
R-factor0.18409
Rwork0.181
R-free0.24263
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.021
RMSD bond angle1.888
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0069)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.9202.050
High resolution limit [Å]2.0002.000
Rmerge0.1800.800
Number of reflections26483
<I/σ(I)>8.22.3
Completeness [%]99.799.2
Redundancy6.76.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
180.01 M ZINC CHLORIDE, 0.1 M TRIS-HCL PH 8.0, 14% (W/V) PEG 6000

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PDB entries from 2024-05-15

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