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459D

DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]288
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Spacegroup nameP 21 21 21
Unit cell lengths25.500, 40.420, 65.550
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 2.300
R-factor0.285

*

R-free0.36100

*

RMSD bond length0.042
RMSD bond angle0.018
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareSHELXL-97
Data quality characteristics
 Overall
High resolution limit [Å]2.200
Rmerge0.050
Number of reflections3281
Completeness [%]87.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.513

*

pH 6.5
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11drop75 (mM)
21dropspermine15 (mM)
31dropduplex3 (mM)
41dropMPD30 (%(w/v))
51dropsodium cacodylate40 (mM)
61reservoirMPD35 (%(w/v))

219869

PDB entries from 2024-05-15

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